Don;t do partial config do the full as it is not determenstic.http://ebookbrowsee.net/2011-lightning-runmodes-and-configs-for-fun-and-profit-pdf-d414804732
Please note I haven;t implemented personally with any commerce integration. Make sure to utilize AEM ecommerce api http://dev.day.com/docs/en/cq/current/javadoc/com/adobe/cq/commerce/api/package-summary.html
It is possible. Refer [1]. It deponds on your use case & you can use oob one like [1], saml, etc.. Or you can write custom one. [1] http://dev.day.com/docs/en/cq/current/deploying/single_sign_on.html
The error you are posting not related to actual problem. For the error follow.http://helpx.adobe.com/experience-manager/kb/invalidpollingconfiguration.html
Seems like required client libs are not included. If repository is small then compare using [1] & the difference will help to find the cause.[1] http://helpx.adobe.com/experience-manager/kb/contentcompareimport.html