Overlay, JSP / JS / CSS / XML overlays aren't officially supported. So, you need to overlay the folder structure(/libs/fmdita/config) and recreate the XML node.
Sharing below another way of creating an overlay :
1- Make a package of "/libs/fmdita/config/w2d_io.xml"
2- Download and extract the package.
3- Open "jcr_root" folder and rename "libs" to "apps"
4- Open "META-INF/vault" folder and open filter.xml
5- Change the "<filter root="/libs/fmdita/config/w2d_io.xml"/>" to "<filter root="/apps/fmdita/config/w2d_io.xml"/>"
6- Save the file.
7- Repackage "jcr_root" and "META-INF" folder.
8- Upload and Install the newly created package from step 7 and check force upload option.