We have set, 2 report suites for our site tracking globally. For one custom tracking we would like to send the data to only one report suite.Is there a way we can do that in DTM?
You can set the report suite with an if/then statement in the rule. There is more information on Search Discovery's blog here: http://www.searchdiscovery.com/blog/managing-multi-suite-tagging-implementation-adobedtm/.
Let me know if you have any questions.